>PF03586 (251 residues) SEDLWISSINSLLLNAEVKSEFDAMEINRLEDAARTGGYDTIRYKSRAEKIVIAHARVLE SSIESVLKFNPYSTQNMVHGLSPPIAALKSITWGDSFMTAAPYYTKLFGVNCDTVMDLLH ISIAILRHANANSGNVDYYLLMGELESALKSYPNLVKYVNFYRSGYVKFMSFLAHLEQRR VEAHHASGRVALEISAALEDLARTHSPEGARRALEYGVSIIIPSVNTIMSIAEELKKDHV EEFEGTAYSEY |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | SEDLWISSINSLLLNAEVKSEFDAMEINRLEDAARTGGYDTIRYKSRAEKIVIAHARVLESSIESVLKFNPYSTQNMVHGLSPPIAALKSITWGDSFMTAAPYYTKLFGVNCDTVMDLLHISIAILRHANANSGNVDYYLLMGELESALKSYPNLVKYVNFYRSGYVKFMSFLAHLEQRRVEAHHASGRVALEISAALEDLARTHSPEGARRALEYGVSIIIPSVNTIMSIAEELKKDHVEEFEGTAYSEY | |||||||||||||||||||
1 | 5cwcA | 0.13 | 0.10 | 3.33 | 0.80 | SPARKS-K | ----------------SEKEELRERLVKICVENAKRKGDDTEEAREAAREAFELVREAAERVLELAIRLIKECVENAREGYD----ISEACRAAEAFKRVAEAAKRAGITSSEVLELAIRLIKECVENAQREGY--DISEACRAAAEAFKRVAEAAKRAGI--TSSETLKRAIEEIRKRVEEAQREGNDISEACRQAAEEFRKKAEELKRR---------------------------------------- | |||||||||||||
2 | 4iggA1 | 0.08 | 0.06 | 2.24 | 1.08 | FFAS-3D | ESQFLKEELVAAVEDVRKQ----GDLMKAAAGEFADDPCS-----SVKRGNMVRAARALLSAVTRLL-----------------------------------ILADM--ADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVD---KLNIMAAKRQQELKD-VGHRDQMAAARGILQKN----VPILYTASQACLQHPDVAAYKANRDL-------IYKQLQQAVTGISNA----AQATASDD- | |||||||||||||
3 | 5y6pa2 | 0.13 | 0.08 | 2.63 | 0.33 | HHpred | --KLYRTASMSAIMQAEQQDRFQLGELNEIVAFLNSG-----SKRLIANVISNNSNLMVSKAADKIFNVVRYGSTRMQK-------SLRDLDWFLRYL----TYAIVAG-DTNILSVNIRGLRELID---N--ACSAASVALREMRKTLFDNASQELVKEYFNVIINEFD--------------------------------------------------------------------------------- | |||||||||||||
4 | 5cwqA | 0.12 | 0.10 | 3.69 | 0.75 | MUSTER | EAERRLQEARKRSEEARERGD-LKELAEALIEEARAVQELARVACERNSEEAERASEKAQRVLEEARKV----SEEAREQGDDEVLALALIAIALAVLALAEVACCR---NSEEAERASEKAQRVLEEARK------VSEEAREQGDDEVLALALIAIALAVLALAEVACCRGN--KEEAERAYEDARRVEEEARKVKESAEEQGDSEVKRLAEEA--------EQLAREARRHVQECRGGWLEHHH---- | |||||||||||||
5 | 5cwnA | 0.17 | 0.12 | 4.08 | 0.79 | CNFpred | ------MDPEEILERAK-------ESLERAREASER--GDEEEFRKAAEKALELAKRLVEQAPELVLEAA------------------------KVALRVAELAAKNGDVFKKAAESALEVAKRLVEVASKE----GDPELVLEAAKVALRVAELAADKEVFKKAAESALEVAKRLVEVASKE---DPELVEEAAKVAEEVRKLAKKQGDEEVYEKA-------RETAREVKEELKRVR------------ | |||||||||||||
6 | 1vt4I3 | 0.18 | 0.10 | 3.25 | 0.65 | HHsearch-2 | -------------------------------------EYALHR-------SIVD-----HYNIPKTFDSDPYLDQYFYS------HIGHHLK-----NIEHPERMTLFRMVFLDFRFLEQK----IRHSTAWNASGSI----------LNTLQQLKFYKPYICDNDPKYERLVAILDF-------------------LP---------------KIEENLICSKYTDLLRI--ALMAEDEAIFEEAHKQVQ | |||||||||||||
7 | 5cwqA | 0.10 | 0.09 | 3.36 | 0.80 | Neff-PPAS | EAERRLQEARKRSEEARERGD-LKELAEALIEEARAVQELARVACERNSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRNSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGN---------------KEEAERAYEDARRVEEEARKVKESAEEQGDSEVKRLAEEAEQLAREARRHVQECRGGWLEHHH------------ | |||||||||||||
8 | 3f1iH | 0.16 | 0.06 | 2.11 | 0.37 | HHsearch | --------------------------------------------------------------------------------------------SHEQ--------------FLKALQNAVTTFVNRMKSNHMRGRSITNDSAVLSLFQSIGMHPQLLELLNQLDERRLYYEGLQDKLAQIRD-ARGALS-----------ALREEH-REKLRRAAEE----------------------------------- | |||||||||||||
9 | 2yfaA | 0.09 | 0.08 | 3.03 | 0.60 | SP3 | ------GSHMGDIGQLNKD----LTDLRIARLQYMIAN-GDDTAAANTLAKLDAFSKQQAYLATTF-----KSPENVKLELGDTISAYKLS--LNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQLLQVRIDVRGYIAELDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRDAVANITTSRAEMTVQ---GADIVKRSDALYQIQLER--------- | |||||||||||||
10 | 5cwmA | 0.14 | 0.12 | 4.06 | 0.96 | PROSPECTOR2 | DPEDELKRVEKLVKEAE----------ELLRQAKEKGS---EEDLEKALRTAEEAAREAKKVLEQAEKEGD------------PEVALRAVELVVRVAELLLRIAKESGSELRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKALERALRVAEEAARLAKRVLELAEEVARRAVELVKRVAELLERIARESGSEEAKERAER-------VREEARELQERVKEL----------RER | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |