Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | FDGAYEKWLAFRDMFNSLIHSNLTLPKVQQFHYLRSSLKGEAANIVQSLEVCDESYDAAWSLLEDRYDNKRLIINNHLKGITNITPLLKESSSGLRSLLDNLSKNLRALKVLKQPVEYWDTIIVFLVVQNLDPTSRREWEKEVSS |
1 | 6gseA | 0.12 | 0.11 | 3.90 | 1.09 | FFAS-3D | | LDTQIFEDREFLSHLEEYLRQV-GGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKEFLQYSE-GTLSREAIQREL----DLPQKQGEPLDQFLWRKRDLYQTL-----YVDAEEEEIIQYVVGTLQPKFKMEVQDGLEQ |
2 | 6gseA | 0.11 | 0.10 | 3.71 | 1.64 | HHsearch | | LDTQIEDPREFLSHLEEYLRQV-GGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKEFLQYSEGTLSRE-AIQRELDLP---Q-KQGEPLDQFLWRKRDLYQTLYV-D----AEEEEIIQYVVGTLQPKFKRFLRHPLP- |
3 | 5cwcA | 0.08 | 0.08 | 3.23 | 0.77 | SPARKS-K | | TEEAREAAREAFELVREAAERA-GIDSSEVLELAIRLIKECVENAQREYDISAEAFKRVAEAAKRAITSVLELAIRLIKECVENAQREGYDSEACRAAAEAFKRVAEAAKRAGITSSETLKRAIEEIRKRVSEACRQAAEEFRKK |
4 | 6r24A | 0.15 | 0.13 | 4.42 | 1.02 | FFAS-3D | | ---DSHKLKNFISEIMLNMSMISWPNDASRIVYCRRHLLNPAAQFVQEQGILEITFDTFIQGLYQHFYKPPDINKI-FNAITQL----SEAKLGIERLNQRFRKIWDRMPPDFMT----EKAAIMTYTRLLTKETYNIVR----- |
5 | 6gseA | 0.12 | 0.11 | 3.90 | 0.89 | MUSTER | | LDTQIFEPREFLSHLEEYLRQV-GGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKEFLQYSE-GTLSREAIQRELDLPQK-QGEP---LDQFLWRKRDLYQTLY-----VDAEEEEIIQYVVGTLQPKFKRF-HPLPKT |
6 | 5n77A | 0.08 | 0.07 | 2.73 | 0.61 | CNFpred | | --------LPAFRLYRMRARSQSMGNAYELLLDLFETKIEQLADEIENI---YSDLEQLSRVIMEGH---GDEYDEALSTLAELED----IGWKVRLCLMDTQRALNFLVRKA-RLPGGQLEQAREILRDIELPHNESLFQKVNF |
7 | 6gseA | 0.11 | 0.10 | 3.72 | 0.99 | HHsearch-2 | | LDTQIEDPREFLSHLEEYLRQV-GGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKEFLQYSEGTLSREA-IQRELDLP---Q-KQGEPLDQFLWRKRDLYQTLYV-D----AEEEEIIQYVVGTLQPKFKRFLRHPLPK |
8 | 5eqzA | 0.12 | 0.11 | 3.90 | 0.68 | Neff-PPAS | | ----YVEEKKEIDSLMEDVLALVNDSSGGKFKDYKDKIN-ELKENLKDIGNLKEKLLNLQNSFQDKLAAKLAALKAAKNTIENITDKDQ--DISKRKIWSEAKLVGVTVPLLGSNTSGNGDKMSKNAVEQIDKVIKFLEE----- |
9 | 6r24A | 0.12 | 0.11 | 3.88 | 1.54 | HHsearch | | ---DSHKLKNFISEIMLNMSMI-SWNDASRIVYCRRHLLNPAAQWANDFVILEITFDTFIQGLYQHFYKPPDI-NKIFNAITQLS---EAKLG-IERLNQRFRKIWDRMPP----DFMTEKAAIMTYTRLLTKETYNIVRMHKP- |
10 | 2w9yA | 0.12 | 0.10 | 3.63 | 0.61 | SP3 | | -----------------------GAMSVASLPEVKNFFPTEQLEFSSSITADFQKHGEMIDEVSKKHPELGKRLATVLEGNKKLDGLSPAAVEYAKKLIHMVTTTLCSLTV-GKPIDDADAKRLHQEFQSLSSEDQAALRKNNPD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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