>PF03355 (260 residues) MSVRIKIDKLRQIVTYFSEFSEEVSVNVDARSELMYIFSTLGGAVNIWAIVPLNANVFYD GGENCVFNIPVLKVKNCLCSFHNDAVVTIEPDLENDAVRLSSDHMVSVDCNHEPIPHRTG TVISLGIDQKKSYIFNFQRYEEKCCGRTVIHLELLLGFIKCISQYQYLSIGFADKNLVLK TPGTRDTFVRRYSMTEWSPALQAYSFKIAIFSLNKLRGFKKKVVMFETKIVMDTDDNILG LLFRDRIGTYRVNVFMAFQD |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | MSVRIKIDKLRQIVTYFSEFSEEVSVNVDARSELMYIFSTLGGAVNIWAIVPLNANVFYDGGENCVFNIPVLKVKNCLCSFHNDAVVTIEPDLENDAVRLSSDHMVSVDCNHEPIPHRTGTVISLGIDQKKSYIFNFQRYEEKCCGRTVIHLELLLGFIKCISQYQYLSIGFADKNLVLKTPGTRDTFVRRYSMTEWSPALQAYSFKIAIFSLNKLRGFKKKVVMFETKIVMDTDDNILGLLFRDRIGTYRVNVFMAFQD | |||||||||||||||||||
1 | 5tupA | 0.11 | 0.10 | 3.49 | 1.01 | SPARKS-K | -MLEARLELLKRVVDAIKDLVQDCNFDCN--DSGIALQAMDNSHV-ALVSMLLKAEGFYRCDRNIALGINLVSLTKVLRAAQNEDILTLKADDSPDA------VNLMFESAETDRISEYDIKL---MDIDQ------EHLETEYAATVEMPSAEFQRICRDLNALSSVVIEATKEGVKFSCQGDIGSGSVTIRQHTSVDKPETFSLKYLVNFCKATSLSS------KVTLCLSQEVP---LLVEYGLGSGHLRFYLAPKI | |||||||||||||
2 | 3lx1A | 0.12 | 0.11 | 3.81 | 1.53 | CNFpred | FEVVFDAKEFADLIATASNLIDEAAFKFT--EEGISMRAMDPSRVVLIDLNLPFSKYEVEE--PETIGINMDQFKKILKRGKAKDTLILRKGD---------ENFLEITFEG------AKRTFRLPLI--DVEELELELPELPFTAKVVLLGEVLKEGIKDASLVSAIKFIAKENEFTMKAEGETNEVEIRLTLEDGLLDLEVTKSAYGIRYLSDMVKGIGKA--DEVILRFGNE-MPLQMEYMIRD-EGRLTFLLAPRV | |||||||||||||
3 | 3p91A | 0.10 | 0.09 | 3.41 | 1.21 | Neff-PPAS | CAFHAKFKLFKRVVESLKSTIDKTNFDCS--DAGIAVQCMDNSVSLVSLLIETDAFDEFQCLKPITLGINLTHLSKILKALDNDCGLILDVKKVDDAVLSITSENKTMKFGLNLVDIEAE---------------SVEIPELQSDAIITLSSAEFLKITKDFSALDSITIGCTKNEVTLTTKGAMCETCMTLSAGLQIEHNKDVTASFALKQISEFAKSAPLAD--NVKLSLSGQA---PLIMEFKGEACVLKFYLAPKF | |||||||||||||
4 | 3p91A | 0.11 | 0.10 | 3.47 | 1.00 | SPARKS-K | CAFHAKFKLFKRVVESLKSTIDKTNFDCSD--AGIAVQCMDNHVSLVSLLIETDAFDEFQCLKPITLGINLTHLSKILKALDNDCGLILDVKKVDDAVLSITSETMKFGLEAESVEIELQSDAIITLSS-----------------------AEFLKITKDFSALDSITIGCTKNEVTLTTKGAMCETCMTLSAIEHNKDVTSFALKQISEFAKSAPLAD------NVKLSLSGQAP---LIMEFKGEACVLKFYLAPKF | |||||||||||||
5 | 3p91A | 0.11 | 0.09 | 3.34 | 0.91 | FFAS-3D | CAFHAKFALFKRVVESLKSTIDKTNFDCS--DAGIAVQCMDNSHVSL-VSLLIETDAFFQCLKPITLGINLTHLSKILKALDNDCGLILDVKKVDDAVLSITSEKFGLNLVDIEAESELQSDAIITLS-----------------------SAEFLKITKDFSADDSITIGCTKNEVTLTTKGAMCETCMTLSAGLQIEHNKDVTASFALKQISKSAPLADNVKLSLLIMEFKGEACVLKFYLAPKF------------- | |||||||||||||
6 | 3p91A | 0.11 | 0.10 | 3.50 | 0.59 | HHpred | CAFHAKFALFKRVVESLKSTIDKTNFDCSD--AGIAVQC-MDNVSLVSLLIETDAFDEFQCLKPITLGINLTHLSKILKALDNDCGLILDVKKVDDAVLSITSE-------------NKTMKFGLNLVDIEAESVEIPE--LQSDAIITLSSAEFLKITKDFSALDDITIGCTKNEVTLTTKGAMCETCMTLSAGLIEH-NKDVTASFALKQISEFAKSAP-LA-DNVKLSLS-GQAPLIMEFKG--EACVLKFYLAPK- | |||||||||||||
7 | 3p91A | 0.10 | 0.09 | 3.40 | 0.92 | MUSTER | FHAKFEAALFKRVVESLKSTIDKTNFDCS--DAGIAVQCMNSHVSLVSLLIETDAFDEFQCLKPITLGINLTHLSKILKALDNDCGLILDVKKVDDAVLSITSENKTMKFGLNLVDIEAES---VEIPEL------------QSDAIITLSSAEFLKITKDFSALDSITIGCTKNEVTLTTKGAMCETCMTLSAGLQIEHNKDVTASFALKQISEFA---KSAPL-NVKLSLSGQA----LIMEFKGEACVLKFYLAPKF | |||||||||||||
8 | 6aigA | 0.10 | 0.09 | 3.38 | 1.48 | CNFpred | AMFRYEAKVFKELVDSVSKILDEGLFIIT--GEGLRLRGMDPARVALVDIEIPFFDFYMAGVERVELGVNMETLKGVVARAKKGDQLEVRVR----------EDKVLFIVES-----VVLRRYLLPNL---EVIVDVPEDISLEDATATVIADVVKKTLRDVELVDIVEFDAGEDYLSIRSVRVETRLLIDLEVK------EPATSRYDVGYLKRMLGVAKIAESIELSFSTD---KPLKMVFKSP-DGSRVTYLLAPST | |||||||||||||
9 | 1ud9A1 | 0.14 | 0.06 | 2.09 | 0.62 | HHsearch-2 | AHIVYDVRDLKAIIQALLKLVDEALFDIKP--EGIQ-LVAIDKISLIKIELPKEMFKEYDVPEEFKFGFNTQYMSKLLKAAKRKEEIIIDAD-SPEVVKLTVFNVNNIEVLPPEVP------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
10 | 1rxzA | 0.12 | 0.11 | 3.92 | 1.14 | Neff-PPAS | IDVIMTGELLKTVTRAIVALVSEARIHFLEK---GLHSRAVDPANVAMVIVDIPKDSFYNIDEEKTIGVDMDRIFDISKSISTKDLVELIVEDES---------TLKVKFGS--------VEYKVALIDPSAIRKEPRIPELELPAKIVMDAGEFKKAIAAADKIDQVIFRSDKEGFRIEAKGDVDSIVFHMTETELIENGGEARSMFSVDYLKEFCKVAGSGD--LLTIHLGTNY-PVRLVFELVGGRAKVEYILAPRI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |