>PF03274 (257 residues) ENAGEGDLVIAEEPEENPRRPRRYTKRDVKCVSYHAYKELEDKHPHHIKLQDWIPKPEEM VAQKVQNQDVGTILSFDVTCLKSITSLGRNDPGNDPSIMSHVLPVVTPWPMSQDHYAPTL FGLLDRYYKGYLENPATFQTWKFTCQEDPSGKRYMGTQFWVPPLGQVNIQFYKNYQIVTC CQALDPFANIFHGTEEEMYDIDSGPDVWCTPSLCFKVIYEGAIGQKQEQKSWLCRLGYGH RMGANDYRRVDLYAMKQ |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | ENAGEGDLVIAEEPEENPRRPRRYTKRDVKCVSYHAYKELEDKHPHHIKLQDWIPKPEEMVAQKVQNQDVGTILSFDVTCLKSITSLGRNDPGNDPSIMSHVLPVVTPWPMSQDHYAPTLFGLLDRYYKGYLENPATFQTWKFTCQEDPSGKRYMGTQFWVPPLGQVNIQFYKNYQIVTCCQALDPFANIFHGTEEEMYDIDSGPDVWCTPSLCFKVIYEGAIGQKQEQKSWLCRLGYGHRMGANDYRRVDLYAMKQ | |||||||||||||||||||
1 | 3zmnA | 0.09 | 0.08 | 2.93 | 0.59 | SPARKS-K | QVGGWGFAWIDN--EDFSPTGLAWRSGEYFALAQMKT-------PETAHFRIA---------AQERRLRIYLRGQKVVNGRNLLPFLMQTPQGAPTLPSTYHPDVAVWAKVGSTWQPCVI-----------TAINYSTGDVTFTEPAGVTASD-GIEIYYVHGDGQFRLRVARDDSAATVFNSFSTMHSVDQNNVETMIAWPQQVELVPGTRLVLEVFVPMVWNERSGHYIQIAAMGRRIEV--------------- | |||||||||||||
2 | 6c0fI2 | 0.15 | 0.11 | 3.78 | 0.43 | FFAS-3D | ENTRVYDETINKEVENSNEPPKIFTNVNAKKSAYEFANILIEILPNVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKKLSSFVEVKKIVGHGRPTSHIPELI-----LNNFQTRLGQTVGRLFQSILPQNP-----------DIEGRQVITLHNQ---RDYIFFRRHRYVF----------------KDNERVGLQELGPQF----TLKLKRLQRGIK----EETEW------------------------- | |||||||||||||
3 | 4ui9N | 0.20 | 0.10 | 3.24 | 0.34 | HHpred | --------------------------------------DLAVELSKE--PEDWVPDPVDADADRFGEAPMCEVMLKDMADSRRINANEKQPPFGYAVILSSE-----FWPPFKDEVPEDIRAALEAYCKKYEQLKA--------------MRT----LSWKHTLGLVTMDVELADRTLS--VAVTPVQAVFQDQAS------------------------------------------------------------- | |||||||||||||
4 | 3zmnA | 0.12 | 0.10 | 3.58 | 0.67 | MUSTER | QVGGWGFAWIDNSPTGLAWRSGEYF----ALAQMKTAHFRIAAQERRLRI--YLRGQKVVNGRNLSDPDSRTVN----------LPFLMQTPQGAPTLPSTYHPDVAVWAKVGSTWQPCV---ITAI-------NYSTGDVTFTEPAGVTASD-GIEIYYVHGDGQFRLRVARD-AATVFNQSFSTMHSVDQNNVETMIAWPQQVELVPGTRLVLEVFTTQVPMVWNERSGHYIQIA---------AMGRRIEV--- | |||||||||||||
5 | 5khaA | 0.11 | 0.06 | 2.09 | 0.76 | CNFpred | ------------------------------LGVFNKHNLPN---YGVFDEKRYFQKGHQHLVFEYLGHKFGVLICEDIWSINTVKQLSQL---------VDTVLVLNSSPYE-VGKPQHRKQTLSELAKQLH------LNIVYVNQVGGQDLIFDGTSFVSNQNGEIALQA-EDLYIAEFDRD-------------------------------------------------------------------------- | |||||||||||||
6 | 2pffB | 0.16 | 0.15 | 5.07 | 1.02 | HHsearch-2 | ENCNDTTLVKTKELIKNYITARIMAKRPFDKKSNSAFRAVGEGNAQLVAIFNTDDYFEELRDYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNIENPSNTPDKLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHAIAETDSWESAITVLFVRCYEAYPNTSLPPSIDSLENNETQEQVQDYVNKTNSHLPANGAKLDLVKNNVSFNAKDIQIPV------YDTFDGSDLRIVDCIIRTQ | |||||||||||||
7 | 3zmnA | 0.10 | 0.08 | 3.07 | 0.69 | Neff-PPAS | -QVGGWGFAWIDNEDFSPTGLAWRSGEYFALAQMKTPETAHFRIAAQERLRIYLRGQKVVNGRNLSDPDSRTVNLP---------FLMQTPQGAPTLPSTYHPDVAVWAKVGSTWQPCVITAI-------------NYSTGDVTFTEPAGVTSDGIEIYYVHGDGQFRLRVARDSAATVFNQSFSTMHSVDQNNVETMIAWPQQVELVPGTRLVLEVFTTVPMVWNERSGHYIQIAAMGRRIEV------------- | |||||||||||||
8 | 3eeqA1 | 0.16 | 0.07 | 2.21 | 0.44 | HHsearch | -----------------------------------------------------------SLI-E-------------------------------NLWRGICIISAS----------EDAFSAGETIKEKLKS-FEIPVV-------------H------YRYKDAEIETIWKCYDAIVFVMAVCKYAKS----KTED------PAI-----VC---I--------DDKINYVIPLLGGHW-GANDIARELSVILN- | |||||||||||||
9 | 3cvgA | 0.11 | 0.10 | 3.54 | 0.51 | SP3 | VYDGPVQLRIGNGGAGQSGLVKELADA---------FIKSKVDS--GFKVA-WYKSDTTVTINYLKDGIVDVGITYSPVAERISIKHGISESPSYYAFRDHFL-IGPPNPAKSGDSDIADFSKHDAAEAG-----NTKPPVRFLSRYDKSATNIKEAELWQVPWATAYSTWYHQYIPIQALTAAI--LLREYTITDYGTYLSIPRGL---RDQVIYKKGTNDADDPLLNPAHLLVGARAKNAEAKEFKEGGQKVIEG | |||||||||||||
10 | 3iz3A1 | 0.09 | 0.09 | 3.28 | 0.84 | PROSPECTOR2 | SIAVEDMYGYVLDTPTRDIWPADEQIEQKGDAVALYTSRALGMFNNTVRIDDLLSPLLSLVYRTYIKGDTM---TMTQGSLDHLTLCAAVDSDITFVGNRMIAPLPEGYIPKPMHRNNSTMKMLSLYVALKKLENFATNSY-----LMAPDTSIILLGAEREPAVNILRRFNRNVSNVRIIGMGDRAVEPNIVRVPFPIDKNISADFHPSEYMYHTALLKTASQNPYSYETYIYITPIAAAVRFPFYSNSAMINRMP | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |