>PF03207 (254 residues) MKKLIKILLLSLFLLLSISCVHDKQELSSKSNLNNQKGYLDNEGANSNYESKKQSILSEL NQLLKQTTNSLKEAKNTTDNLNASNEANKVVEAVINAVNLISSAADQVKSATKNMHDLAQ MAEIDLEKIKNSSDKAIFASNLAKEAYSLTKAAEQNMQKLYKEQQKISESESESDYSDSA EIKQAKEAVEIAWKATVEAKDKLIDVENTVKETLDKIKTETTNNTKLADIKEAAELVLQI AKNAKEIVQEVVAL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | MKKLIKILLLSLFLLLSISCVHDKQELSSKSNLNNQKGYLDNEGANSNYESKKQSILSELNQLLKQTTNSLKEAKNTTDNLNASNEANKVVEAVINAVNLISSAADQVKSATKNMHDLAQMAEIDLEKIKNSSDKAIFASNLAKEAYSLTKAAEQNMQKLYKEQQKISESESESDYSDSAEIKQAKEAVEIAWKATVEAKDKLIDVENTVKETLDKIKTETTNNTKLADIKEAAELVLQIAKNAKEIVQEVVAL | |||||||||||||||||||
1 | 4fzsA | 0.10 | 0.07 | 2.80 | 1.22 | FFAS-3D | ---------------------------------------------DIWFEEKLQE-VECEEQRLRKLHAVVETLVNHRKEL--ALNTAQFAKSLAMLGSSETALSRALSQLAEVEEKIEQLHQEQAELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEARLLWAN---KPDKLQQAKDEILEWESRVTQYERDFERISTVVRKEVIRFEKEKSKDFKNH-VIKYLETLLYSQQQLAKYWE----- | |||||||||||||
2 | 5nnvA | 0.10 | 0.09 | 3.24 | 1.08 | MUSTER | KEEELAESSAISAKEAKIE------------DTRDKIQALDES------VDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALK----EAKEDLSFLTSESS-STSGEEKLEEAAKHKLNDKTKTIELIALRRD---QRIKLQHGLDTYERELKEKRLYKQKTTLL | |||||||||||||
3 | 4tqlA | 0.17 | 0.15 | 4.78 | 1.11 | PROSPECTOR2 | YKQMVQELEKARDRMEKLY---------------------------KEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKL--YDEAKKKIEQMIQQIELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLL--KQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMDDIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQV---------AEELIKKILQLIEKAKEIAEKVLKG | |||||||||||||
4 | 4uosA | 0.15 | 0.11 | 3.57 | 0.83 | SPARKS-K | -------------------------------------------GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKENGEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELG--VDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKILKAKEMAEKILKKVKELGVG------------------------------- | |||||||||||||
5 | 1i49A | 0.10 | 0.08 | 2.90 | 1.22 | FFAS-3D | -----------------------------------------SRTVDLELELQ----IELLRETKRKYESVLQLGRALTAHLYSLQTQHALGDAFADLSQKSPELQEEFGYNAETQKLLCKNGETLLGAVNFFVSSINLVTKTMEDTLMTVKQYEAARLEYDAYRTDLEESLGPRDAGTRGRLESAQATFQ-------AHRDKYEKLRGDVAIKLKFLEENKIK-VMHKQLLLFHNAVSAYFAGNQKQLEQ---- | |||||||||||||
6 | 3u0cA | 0.13 | 0.07 | 2.58 | 0.25 | HHpred | -----------------------------------------------NASSQLTLLIGNLIQILGE--KSLTALTNKITAWKSQQQALEFSDKINTLLSETEGLTRDYEKQINKLKNADSKIK----------------------------DLENK---INQIQTRLSELDPSPEKKLSREEIQLTIKKDAAVKDRTLIE-------QKTLSIHSKLT--------------------DKSMQLEKEIDS---- | |||||||||||||
7 | 4tqlA | 0.19 | 0.17 | 5.34 | 1.05 | MUSTER | YKQMVQELEKARDRMEKLY---------------------------KEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKL--YDEAKKKIEQMIQQIKQKQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKMDDELLEKIKKIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIE--KAKQVAEELIKKILQLIEKAKEIAEKVLKG | |||||||||||||
8 | 4tqlA | 0.16 | 0.14 | 4.56 | 0.80 | CNFpred | ARDRMEKLYKEMVELIQKAIE--------------------------LMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQ-DKQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQL--KEEMKKMKEKMEKLLKEMKQRMEEVKKKMD---DELLEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAELVKRAKQLIEKAKQ---------VAEELIKKILQLIEKAKEIAEKVLKG | |||||||||||||
9 | 1vt4I3 | 0.21 | 0.11 | 3.63 | 0.82 | HHsearch-2 | -----------------------------------------------EYALH-RSIVDH---------------------------------------YNIPKTFD--------SDDL----------IPPYLD-QYFYSHIGHHLKNIEHPERMTLVFLDFREQKIRHDSWNASGSILNTLQQLKF-----YKPYICDND--PKYERLVNAILDFLPKIELICSKYTDLLRIALMAE-DEAIFEEAHKQVQRG | |||||||||||||
10 | 2yfaA | 0.12 | 0.11 | 3.86 | 0.86 | Neff-PPAS | ------------------------SHMGDIGQLNKDLTDLRIARLQYMIANGDDTAAANTLAKLDAFSKQQAYLATTFENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAE------NSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDARDAVANITTSRAEMTVQGADIVKRSDALYQI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |