>PF02958 (284 residues) GENYATVMLKVEIEVQLKDLSTKSLCFMLKVNHEKDQLRELLKGHDVFDAEKSMYDEIIP AFEKLYADVGVEVKFGPKSYDLATKEEYILLENLCVRGFKNANRLEGLDMEHTKCVLKKL AQWHAASAVFVTVKGQFEEKYIKCYFHEEGKESLRTVFEGMGKVFKSCAKNYSNYEEYAA DIEALDNKLVDELYKTAIPDPNEFNVLNHGDCWSNNVMFQYDAFGNIKETYLIDLQMPKY GTPAQDLYYFLISSTKYEIKIKQFDYFIKFYHDNLVENLKLLKY |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | GENYATVMLKVEIEVQLKDLSTKSLCFMLKVNHEKDQLRELLKGHDVFDAEKSMYDEIIPAFEKLYADVGVEVKFGPKSYDLATKEEYILLENLCVRGFKNANRLEGLDMEHTKCVLKKLAQWHAASAVFVTVKGQFEEKYIKCYFHEEGKESLRTVFEGMGKVFKSCAKNYSNYEEYAADIEALDNKLVDELYKTAIPDPNEFNVLNHGDCWSNNVMFQYDAFGNIKETYLIDLQMPKYGTPAQDLYYFLISSTKYEIKIKQFDYFIKFYHDNLVENLKLLKY | |||||||||||||||||||
1 | 2pulA | 0.13 | 0.11 | 3.81 | 1.29 | SPARKS-K | GDGNLNYVFHIYDR-----------ALIIKQAVPYAKVESWPLTIDRARIESSALIRQGEHVPHLV----------PRVFYSDTEMAVTVMEDLLKIARKGLIEGENYPH-LSQHIGEFLGKTLFYSSDYA-LEPKVKKQLVKQFTNPELCDITERLVTDPFEELRPFVEKLWNNDSVKIEAAKLKKSFLTS-----------AETLIHGDLHTGSIFASEHE------TKVIDPEFAFYGPIGFDVGQFIANLFDREPLYEHVNQVWETFEETFSEAWQKDSL | |||||||||||||
2 | 3atsA | 0.11 | 0.10 | 3.65 | 2.04 | FFAS-3D | STGMSSETIILTARWQQ-DGRSIQQKLVARVAPAAEDVPVF--PTYRLDHQFEVIRLVGEL-------TDVP---VPRVRWIETTGDFFLMDYVEGVVPPDVMPGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTDT-----TLHRHFNWVRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAA-------REPVLLWGDARVGNVLYRDF-----QPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGREDDVRATYQALTGVELGDLHW | |||||||||||||
3 | 3csvA | 0.13 | 0.10 | 3.52 | 2.21 | HHpred | ------RYQRLR----SPTGA----KAVL-DWSPEE--------GGDTQPFV----DL----AQYLRNLDIS---APEIYAEEHARGLLLIEDLGDALFTEVINNDPQE-PLYRAAVDLLIHLHDAQTP---ELARLDP----ETLS-ET-RLAFSE-------YRYAILGDAAE-DNRKRFEHRFAQI----LSAQL----EGDVFVHRDFHAQNLLWLPEREG-LARVGVIDFQDAKLGHRAYDLVSLLQDAR-RDVPAQVE-AQIDHYIQATGVDES---- | |||||||||||||
4 | 6fucA | 0.13 | 0.11 | 3.88 | 1.11 | MUSTER | DAGWEPVTESGAAVFRSADGS-----RYAKCVP--------ADQVAALEAERDRVSWLST--------QDIP---GPRVLDWRVGAAGLLTSTV--EGIPADR----ASASMLRAAWEPIADAVRRLHELPPEKCPFTRELGE------MFSMARDVVAREAVNPDFLPEEQRHTP-----PGELLARLAPYVGQRLAQEAAQT-VVCHGDLCLPNIILD---PDTLDVAGFIDLGRLGRADPYADLALLFATARDERWSQSAEEEFAARY-RDRERFYLHLDP | |||||||||||||
5 | 2olcA | 0.15 | 0.12 | 4.18 | 1.24 | CNFpred | GDGNLNYVFHIYD-----------RALIIKQAVPY---------IDRARIESSALIRQGEHVP----------HLVPRVFYSDTEMAVTVMEDLS--HLKIARKGLENYPHLSQHIGEFLGKTLFYSSDYAL-EPKVKKQLVKQFT---NPELCDITERLVFTDPFFDHDTNDFEEELRPFVEKLWDSVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASE------HETKVIDPEFAFYGPIGFDVGQFIANLF-REPLYEHVNQVWETFEETFSEAWQKDSL | |||||||||||||
6 | 2pulA | 0.14 | 0.12 | 4.18 | 0.83 | HHsearch-2 | GDGNLNYVFHIYD--------R---ALIIKQAVPYAKVESWPLTIDRARIESSALIRQGEHV----------PHLVPRVFYSDTEMAVTVMEDLSH--LKIAKGIEGNYPHLSQHIGEFLGKTLFYSSDYALEPKVK-KQLVKQF-T-N--PELCDITERLTDPFFDHTNDFEELRPFVEKVKIEAAKLKKSF-------LTSAETLIHGDLHTGSIFASEH------ETKVIDPEFAFYGPIGFDVGQFIANLFLREPLYEHVNQVWETFEETFSEAWQKDGF | |||||||||||||
7 | 2pulA | 0.13 | 0.12 | 4.03 | 1.51 | Neff-PPAS | GDGNLNYVFHIYDR-----------ALIIKQAVPYAKVESWPLTIDRARIESSALIRQGEHV----------PHLVPRVFYSDTEMAVTVMEDLSLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQLVKQFT----NPELCDITERLVFTDPFFDHDTNDFEEELRPFVEKLWNSVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASEH------ETKVIDPEFAFYGPIGFDVGQFIANLFDREPLYEHVNQVWETFEETFSEAWQKDSL | |||||||||||||
8 | 2pulA | 0.14 | 0.12 | 4.18 | 1.25 | HHsearch | GDGNLNYVFHIYD--------R---ALIIKQAVPYAKVESWPLTIDRARIESSALIRQGEHV----------PHLVPRVFYSDTEMAVTVMEDLSH--LKIAKGIEENYPHLSQHIGEFLGKTLFYSSDYALEPKVK-KQLVKQFTNP---E-LCDITERLFDPFFDHTNDFEELRPFVEKVKIEAAKLKKSF-------LTSAETLIHGDLHTGSIFASEH------ETKVIDPEFAFYGPIGFDVGQFIANLFLREPLYEHVNQVWETFEETFSEAWQKDG- | |||||||||||||
9 | 3atsA | 0.13 | 0.11 | 3.91 | 1.76 | PROSPECTOR2 | STGMSSETIILTARWQQ-DGRSIQQKLVARVAPAAEDVP--VFPTYRLDHQFEVIRLVGEL----------TDVPVPRVRWIETTTPFFLMDYVEGVVPPGDNWFADAPAERQDATVAALATLHSIPNAQNT-------------FSFLTDTTLHRHFNWVRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAA-------REPVLLWGDARVGNVLYRDF-----QPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLEDDVRATYQALTMKHLLGEEH | |||||||||||||
10 | 2pulA | 0.12 | 0.10 | 3.51 | 1.82 | SAM | -DGNLNYVFHIYDR-----------ALIIKQAVPYAKVESWPLTIDRARIESSALIRQGEHV-------PHL---VPRVFYSDTEMAVTVMEDLSHLIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKQLVKQFTNPELCDITEVFTDPFFDHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSF-------LTSAETLIHGDLHTGSIFASEH------ETKVIDPEFAFYGPIGFDVGQFIANLFLREPLYEHVNQVWETFEETF--------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |