>PF02646 (298 residues) EQMDQLLNPLGEKLEAFKKKVEETYDDENRQRATLKEQIKQMAELNKTMSEDAKNLTKAL KGDSKTQGNWGEVILQRILEKSGLRKDEEYFVEQSVTMDDGRRIRPDVVVRLPDEKFLVI DSKVSLTAYEQFSSAEDEADQERALKEHINSIRTHVKGLSEKNYQHIHGDRSPDFVLLFI PIEPAFGAALQHDSNLYYEAFDKNIVIVSPSTLLATLATIDSVWKQEYQNKNAMEIAKRG GALYDKFVLFVESMNDIGQRIRQTQDSYDEAMGRLSTGAGNLVRQAEMIRKLGAKTSK |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | EQMDQLLNPLGEKLEAFKKKVEETYDDENRQRATLKEQIKQMAELNKTMSEDAKNLTKALKGDSKTQGNWGEVILQRILEKSGLRKDEEYFVEQSVTMDDGRRIRPDVVVRLPDEKFLVIDSKVSLTAYEQFSSAEDEADQERALKEHINSIRTHVKGLSEKNYQHIHGDRSPDFVLLFIPIEPAFGAALQHDSNLYYEAFDKNIVIVSPSTLLATLATIDSVWKQEYQNKNAMEIAKRGGALYDKFVLFVESMNDIGQRIRQTQDSYDEAMGRLSTGAGNLVRQAEMIRKLGAKTSK | |||||||||||||||||||
1 | 5xg2A | 0.10 | 0.07 | 2.63 | 1.22 | FFAS-3D | -RWGKRKEKLIEEIRAREEERNAL----VVRLGEIDRTFAVAREEFDTVVKELEEARKSL-----YEGEARIKRAEEKERLKAEILTGE------------------------------------ARLPGLRERAENLRRLVEEKRAEISELERRLSSITSQ-------------------SFELRIKLSDLEKELELARKD-------LEKVLAEERAVRE--EIEVAKRRINELDTLIERERGELAKLRGRIERLERKRDKLKKAIRAVEKEIAALREELSRVEGKLEGL------ | |||||||||||||
2 | 5cwqA | 0.14 | 0.10 | 3.56 | 1.07 | PROSPECTOR2 | EELERESEEAERRLQEARKRSEEARER-----GDLKELAEALIEEARAVQELARVACER---GNSEEAERASEKAQRVLEEA-------------------------------------------RKVSEEAREQGDDEVLALALIAIALAVLALAEVACCR------------------GNSEEAERASEKAQRVLEEARKDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQGD--SEVKRLAEEAEQLARE----ARRHVQECRGGWLEHHH | |||||||||||||
3 | 5j65A | 0.13 | 0.10 | 3.61 | 0.87 | SPARKS-K | PSIDGYFKKLQDELDNIVDAIAKAIKDFKARCGILIKEAKQYEEAAKNIVTSLDQFLHGDQKK-----LEGVINIQKRLKEVQLNQAHG----------------------------------------------ESSPAHKELLEKVKNLKTTLERTIKAQDLEKKVEYSFLLGPLLGFVVYEILENIKNQIDEIKKQLDSA-------RDVKIIGMLNSINTDIDNLYSQGQEAIKVFQKLQGIWATIGAQIENLRTSLQEVQDSADEIQIELEDASDVVAQEARDFTLNAYSTSN | |||||||||||||
4 | 6ewyA | 0.09 | 0.06 | 2.18 | 1.21 | FFAS-3D | AALIADVAKANQRLQDLSDEVQAEQESVNKAMVDVETARDNAAAAEDDLEVSQRAVKDANAAIAAAQHRFDTF-AAATYMNGPSVS---------------------------------------------YLSASSPDETVTAAKTLSASSQAVMANLQR--------------------------------------------------------ARTERVNTESAARLAKQKADKAAADAKASQDAAVAALTETRRKFDEQREEVQRLAAERDAAQARLQAARLVAWSS------ | |||||||||||||
5 | 5lm1A | 0.11 | 0.09 | 3.26 | 0.31 | HHpred | -VLSGVFTDVEASLKDIRDLLEE----DELLEQKFQEAVGISKAELAEVRREWAKHEKASFTNSELHRAMNLHV--GNLRLLSGPLD-QVRA------------------ALPTPALSPEDKA-VLQNLKRILAKVQEDQRVSLEQQLRELIQ--KDDITAS-LVTTD--HS--------EMKKLFEEQLKKYDQLKVYLEQN------LAAQDRVLCALTEANVQYAAVRRVSDLDQKWNSTLQTLVASYEAYEDLMKKSQEGRDFYADLESKVA----ALLERTQSTCQA------ | |||||||||||||
6 | 1sjjA | 0.11 | 0.10 | 3.65 | 0.79 | MUSTER | EAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWME-GAMEDLQDTFIVH-------TIEEIQGL-------TTAHEQFKATPDADKERQAILGIHNEVSKIVQTY-HVNMAGTNPYTTITPQEI---WEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEITLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEAMEHIRVGWEQLLTTIARTINEVENQILTRDA | |||||||||||||
7 | 5gheA | 0.14 | 0.12 | 4.01 | 0.84 | CNFpred | IKKDGYFKKLQDELDNIVDN-NSDDDAIAKAIKDFKARCGILIKEAKQYEEAAKNIVTSLDQFLHG--LEGVINIQKRLKEV-------------------------------------------QTALNQAHGEPAHKELLEKVKNLKTTLERTIKAEQDLKVEYSFLGPLLGFVVYEILENTAVQHIKNQIDEIKKQLDSAQHDLDRDVKIIGMLNSINTDIDN--LYSQGQEAIKVFQKLQGIWATIGAQIENLRTTSLQEVDDADEIQIELEDASDAWLVVAQEARDFTLNAYS | |||||||||||||
8 | 2gb7B | 0.15 | 0.11 | 3.73 | 0.47 | HHsearch-2 | KNSDYFLNNPSEYIIAMRKNCWKEFEPFEKEFTMLSYLYDAIRDFTMEYPTHIYDLALNTQSRRSRAGKEFESILELLMMGAGI----PVDVQGAIQ--IG--KLVDLVMPGNKRNTMLISAKTTLERWQEVPE--------------------EVNRTREM-YL-----ATLDNVVVVTT-VENKNF----------K-YKNNNRVLTFEDMLQSAMELSRKWNNVSYDSEKEEIQQSILKQIEKYS-----------DFPYVVNYYRNRLSALF--------------D------- | |||||||||||||
9 | 5cwqA | 0.12 | 0.09 | 3.22 | 0.85 | Neff-PPAS | EELERESEEAERRLQEARKRSEEARERG-----DLKELAEALIEEARAVQELARVACERNSEEAERASEKAQRVLEEARKVSEEAREQG-----------------------------------------------DDEVLALALIAIALAVLALAEVACCRG--------NSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQG------DSEVKRLAEEAEQLAREARRHVQECRGGWLEHHH | |||||||||||||
10 | 3s1sA1 | 0.12 | 0.06 | 2.26 | 0.67 | HHsearch | ----------------------------------------LNNCVFSYGDDEVS-----------VYHPICEAALNQALVNTGLDS--TYEVVHHELVG---SIEADFVIKNKQKKLLIVEVKRTKSQVS------S--------TRYRLQAQSYVREANQHYYCL----TNLEIIDFFKHDP--------NKPVVSQQIIEPSPIVVGNFSDTV--------------SEFYNRLVEAFQNIIDISVN--DA--------------G------------TYK--------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |