>PF02414 (288 residues) KHQHKLISLTSTLDFLNKKDKKYTQQNILYCFNENLKRNGLAPTTLRTMQNYLYKLEKVL KVTTNYYQHMGVNCGTEIYYKLKYPKKECYQKINKYFKERKNSRFKSRVNNHFKDNVSKN SSVNSVECLNNKNNNTKEERRIKEIEKYQLRNYFNNCNFKTEEALSILYLNIDKDTKIEA INILKQNEIALIKKFNIKKSCMKEKQKKLKEILHNTRKKLEENGYNPKQLEINLQKVYEN YKYKPHFIIENHKYSDLNNIKRKLEKSIERKKENSQQNYQNLKENIFN |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | KHQHKLISLTSTLDFLNKKDKKYTQQNILYCFNENLKRNGLAPTTLRTMQNYLYKLEKVLKVTTNYYQHMGVNCGTEIYYKLKYPKKECYQKINKYFKERKNSRFKSRVNNHFKDNVSKNSSVNSVECLNNKNNNTKEERRIKEIEKYQLRNYFNNCNFKTEEALSILYLNIDKDTKIEAINILKQNEIALIKKFNIKKSCMKEKQKKLKEILHNTRKKLEENGYNPKQLEINLQKVYENYKYKPHFIIENHKYSDLNNIKRKLEKSIERKKENSQQNYQNLKENIFN | |||||||||||||||||||
1 | 5xg2A | 0.16 | 0.13 | 4.27 | 1.08 | FFAS-3D | -----------------------TKGAIVRWGKEKLIEE------IRAREEERNALVVRL---GEIDRTFAV-------------AREEFDTVVKELEEKSLYEGEARIKRAEEEKERLKAEILTGEALPGLRERAENLRRLVEEKRAEISELERRLSSITSQSFELRIKLSDLEKELELARKDLEKVLAEERAVREEIEVAKRRINELDTLIERERGELAKLRGRIERLERKRDKLKKA--------LENPEARELTEKIRAVEKEIAALREELSRVEGKLEG---- | |||||||||||||
2 | 4u0qA | 0.12 | 0.11 | 4.01 | 1.00 | MUSTER | KEGHLDFVI--IPHYTFL----DYYKHLSYNSIYHKSST---YGKYIAVDAFIKKINEAYDKVKSKCNDIKNDLIATIK-KLEHPMMDEYNTKKKKLIKCIKNHENDFNKICMDMKNYGTNLFEQLSCYNNNFYDEYIHKLILSVKSKNLNKDLSDMTILQQSELLLTNLNMGSYIYIDTIKFIHKEMKHIFNRIEYHTKIINDKTKIIQDKIKLNI----WRTFQKDELLKRILDMSNEYSL---FITSDHLRQMLYNTFYSKEKHLNNIFHHLIYVLQM-K----- | |||||||||||||
3 | 4u0qA | 0.08 | 0.07 | 2.89 | 1.16 | Neff-PPAS | ------LDFVIIPHYTFLDYYKHLSYNSIYHKSSTYGKYIAVDAFIKKINEAYDKVKSKCNDIKNDLIATIKKLEHPMMDEYNTKKKKLIKCIKNHENDKICMDMKNYGTNLFEQLSCYNNN-FCNTNGIRYHYDEYIHKLILSVKSKNLNKDLSDMTNILQQSELLLTNKMGSYIYIDTIKFIHKEMKHIFNRIEYHTKIINDKTKIIQDKIKLNI----WRTFQKDELLKRILDMSNEYSLDHLRQMLYNTFYSKEKHLNNIFHHLIYVLQMK------------- | |||||||||||||
4 | 6ek4A | 0.11 | 0.11 | 3.88 | 1.02 | PROSPECTOR2 | VVVKTLSQAVKNIWRLSHQQKSGIIQEKTLRISLYSRD------LDEAARASVPQLQTVLRPPQDYFLTLDPELDDETRNTLLEARSEHIRNLKKDVKGRSLRKEANLMASRIADVSNVVILERLESSLKEEQERKAEIQADIAQQEKNKAKLVVDFKDYIPNISDLDKLDLANPKKELIKQAIKQGVEIAKKILGNISKGLDERINQINKDCDDLKIQLKGVEQRIAGIEDQAAKLEQAWN---IFAKQLQNTIDGKIDQQDLTKIIHKQLDFLDDLALQYHSMLLS | |||||||||||||
5 | 4m0mA2 | 0.14 | 0.12 | 4.04 | 0.83 | SPARKS-K | RLSYLQHSLTSIANYYHYHCDEKSNESVKNLLLERVKESRTKPEAIKHLEQTD-EVRQILESKGFLWQQIN---------HISPNARQYCEQVKAALREHLEHTQKEEIRKADRDNIVNDSSK----------DSQQKYREIRREVIELNAKATKTLNLESQTLNQLSKAHYGETSTDKITQRLDGYKNRNWFWNSVKEVLNFEVKEQIADKLKERLVDLKEKGNDVNAITRELGKAREDLIEH------YKKTGELDKIINKSEELLVARK---------------- | |||||||||||||
6 | 3g9gA | 0.13 | 0.09 | 3.27 | 1.05 | FFAS-3D | -------------KYADSILTTKSPYEATETIRIRLSQV------KLLNKDFYLLFKELANLKRNYAQQL--------------------RKIIAENEDITKILNAQMIE---------SNVLTPQEMSAFRFNSLGELRNVWDTVIEELKSDLK--------------------SSTEYYNTLDQQVVRELKESVENNTSWRESKDLHSK-LSKNAASIEHYSKNRRQWDQQSPYLFELFE-----TIDYNRLDTLKNCMLRFQTSFSDYLLNTTKECETVMTKF-- | |||||||||||||
7 | 2lciA | 0.21 | 0.05 | 1.43 | 0.38 | HHpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NDELIKKIKKEVENQGYDSDELKKEMKKLAEEKNFEKILIISN-DKQLLKEMLELISKLGYKV----------------- | |||||||||||||
8 | 4z8nA | 0.13 | 0.12 | 4.13 | 1.00 | MUSTER | --GSDILRYLDFSGQIISTVYPYVQMNYFAEIKYYITYHYEKKNYDEAYNQSVNPLMSSIQNQINSCVPKKAALEKTIF-VLEYPNLSNYEAKHNEYKQQLDAYKNCVQMESYTDRMSKNSVKCTDACETDTYEIEIYVERVKEVNHNNYVNYLSTLK-LGVTLMLKVKQEIDNNVTISAINFLQEEMLDIITIGEAHTGKIIHGKENVLKLQNNN----IPPQVPLSTLKKLYFDSANFYAT---YKFSLKRADTTTAALKEKGKLLANLYNKLITYVSEK------ | |||||||||||||
9 | 4z8nA | 0.12 | 0.11 | 3.82 | 0.77 | CNFpred | --YVQMNYFAEIKYYITY--HYEAKKNYDEAYNQSVNP------LMSSIQNQINSCVPKKAALEKTIFVLEYPEINLSNYEAKHEYKQQLDAYKNCVQMESYTDRMSKFNEKIYSILNSV--KCTDACETDTYELEIYVERVKEVNHNNYVNYLSTLKASLQLGVTLMLKEIDNNVTISAINFLQEEMLDIITIGE----AHTGKIIHGKENVLKLQNNNIPPQVPLSTLKKLYFDSANFYA---TYKFS-------LKRADTTTAALKEKGKLLANLYNKLITYVSE | |||||||||||||
10 | 1vt4I3 | 0.13 | 0.06 | 2.16 | 0.51 | HHsearch-2 | ----------------------------------------------------EYALHRSI------------------------------------------------------------------------------------VDHYNIPKTFDSDDLIPPYLDQYFYSHLKNIEHPERMTLFFLDFRFLEQKIRHWNGSILNTLQQLKFYKPY-------ICDNDPKYERLVNAILDFL----PKIEENLICSKYTDLLRIALMAE-----DEAIFEEAHKQVQRG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |