>PF02323 (262 residues) MKRPNNRPTNTMSLILCLTLSSLCVSSQSASVHGKNFATNRAVKSSSPFVVLSPDDNVVS MSGENGYRSALREAFDKSSRDYDDNGEDVFSNEKRRLRFHKRRLRFDRRDQDEGNFRRFP TNAVSMSADENSPFDLSNEDGAVYQRDLRAPRLRFYSLRKRAAGGMEQSEGQNPETESHS RRKRSVLTPSLSSLGESLESGISKRISINQDLKAITDMLLTEQIRERQRYLADLRQRLLE KGKRSSGVSLLTSNKDEEQREL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | MKRPNNRPTNTMSLILCLTLSSLCVSSQSASVHGKNFATNRAVKSSSPFVVLSPDDNVVSMSGENGYRSALREAFDKSSRDYDDNGEDVFSNEKRRLRFHKRRLRFDRRDQDEGNFRRFPTNAVSMSADENSPFDLSNEDGAVYQRDLRAPRLRFYSLRKRAAGGMEQSEGQNPETESHSRRKRSVLTPSLSSLGESLESGISKRISINQDLKAITDMLLTEQIRERQRYLADLRQRLLEKGKRSSGVSLLTSNKDEEQREL | |||||||||||||||||||
1 | 5yfpE | 0.08 | 0.08 | 3.16 | 0.83 | SPARKS-K | EEKATHVIQLFIQRVFAQKIEPRFEVLLRNSLSISNLAYVRILHGLFTLFLIDYFQLLEIDDSNQILSTTLEQCFADLFSHYLYDRSKYFGIEKRSLEAILVDMTSKFTVNYDKEINKRVLLDKYKEKLSTNTASDIDNSPNSPANYSLNDVDSMLKCVVESTARVMELIPNKAHLYILEILKIMFLGIVDSYMEIALEVAYWKICKVDGVVNLNFLKFISMSTEILDLLSISIKSIFLPLLNNSPEIKAQIIEMTNSQIQK | |||||||||||||
2 | 5lqxG | 0.12 | 0.11 | 3.76 | 0.55 | FFAS-3D | ----SIKNIEKITNTMKVVASTRMGRAQRAMASSRAFTSTPETAEKTLIIAVSSDKGLCG-----SIHSQIAKATRAKLQETPNAD-VVTIGDKIKAQMLRTHLSFNGVGKEAPTFWEASLIADEIRKLGDYDKIYNKFVSGVAF---EPSVFPSFSPISIEESPKLSEFELEEDQAIPTSLSQISLTNAINAMAEGYASEISARRAMDNASKNAGEMINKYSILYNRTRQAVITNELVDI--------------------- | |||||||||||||
3 | 6chgB | 0.20 | 0.15 | 4.76 | 0.36 | HHpred | --------------------KLKYCGTDFDKSSINL--MDR-----SDKLAFSLDDHSVSVSENCGWRSVRSDVCMKTPVGCDFYGYRDKGLQV----IHEGRLTLKPHAGDRIGFLLTYSLKRIQENKECEPTNVVRDKNQLFKYELENSSFEVFVNGVSHGIAFEGLTPQYNEKFYLHHEIRNGYYATLSSFQ-------GGTASIIVDIKTLNDIY-NEQIAS--DIVWDLID-------------------------- | |||||||||||||
4 | 5hamA | 0.11 | 0.11 | 3.83 | 0.64 | MUSTER | ----DYWYTNEITHLLTAQLDEKKFSVQPAITFRNTALTEEMLKYTAKGEEKNKILAEVQETIKIANLIPDKEERALMLGDAKKREEILKLSDAEREKLKNDLLR-GGEAQQQINEDILNRATKDIKDNGKEPIEMGYGHWTVYDKKDNQIILTFNDSLGNSINYDGQKLPKLIDKTLGNLPNKPIIIEQTKQQTDQSACGV---FTVDNGIKIAKGQAILSTEESKGEKGLRLREHHAQI--TDAMFKQDAQWIRQQ---- | |||||||||||||
5 | 5jtgA | 0.13 | 0.06 | 1.98 | 0.39 | CNFpred | -----------ADYLLYSLIDALVDDYFVLLEKIDD------------------------------EIDVLEEEVLER-----------EKETVQRTHQLKRNLV-------------------------------------ELRKTIWPLREVLSSLYRDVPPLIEK--------------------------------------ETVPYFRKVYDHTIADTVETFRDIVSGLLDVYLSSV-------------------- | |||||||||||||
6 | 2pffB | 0.21 | 0.18 | 5.70 | 0.86 | HHsearch-2 | LENPSNTPDKSCPLIGVIQLAHYVVTAKLLTGHSQGLVTAVAIAWESFFVSVRKAITVLFFIGVRCY-----EAYSLPPSILEDSLEPSPMLSISNLTQEQVQVNKTNSHLPAGKVEVNGAKNLVVSGKAKAPSGLDQSRIPFSERKLKF-----------------------------SNRFLPVASPFHSHLLVPNVSFNAKDIQIPSDLRVIVDCI----IRLPVKWETTTQFKLTHRNKDGTGVRVIVAGDINPDDDY | |||||||||||||
7 | 2tmaA | 0.10 | 0.09 | 3.35 | 1.20 | Neff-PPAS | ------------------------NALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDEL---DKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKA---ADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVA-RKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKL | |||||||||||||
8 | 3bhpC | 0.30 | 0.05 | 1.62 | 0.42 | HHsearch | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ISNAKIARI---NELGVITEEEKAEQQKLRQEYLKGFRSS----------KNTLKSVLE------ | |||||||||||||
9 | 5n8oA | 0.11 | 0.11 | 3.88 | 0.53 | SP3 | LDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVAQDRPSLAIVSGQGGARERVAELVMMAREQGREVQIIAADRRSQMNLKQDERLSGELITGRRQLLEGMAFTPGSTIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRGTGSLMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFA-ASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGHPTALSPVWLDSRSRYL | |||||||||||||
10 | 5gaoE | 0.05 | 0.05 | 2.34 | 0.98 | PROSPECTOR2 | AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATKSNKK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |