>PF01889 (276 residues) ILQFVNKYYIEPIIYDSGYNPVNTLTWALILGVCVFGVIKLLDRMKVEVDERFIYSIIPF VLAGSSLRVLEDANAFSAPLKYLIITPNIYFVVFVVTLACLVVSKKLYDLGVAGDWKKTF AAAGGLWFLANLTALLYLEDIVRPDALVLILVIGTLVAFSIYGLARWQGIGLITDRLNFT ILLAHLMDASSTFIGIDMLGYYEKHVVPAYLIDLTGTALVMYPLKLAIFIPVIYVLDTQF NDSEESISLRTFVKMVIIVLGLSPATRNTLRMALGI |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | ILQFVNKYYIEPIIYDSGYNPVNTLTWALILGVCVFGVIKLLDRMKVEVDERFIYSIIPFVLAGSSLRVLEDANAFSAPLKYLIITPNIYFVVFVVTLACLVVSKKLYDLGVAGDWKKTFAAAGGLWFLANLTALLYLEDIVRPDALVLILVIGTLVAFSIYGLARWQGIGLITDRLNFTILLAHLMDASSTFIGIDMLGYYEKHVVPAYLIDLTGTALVMYPLKLAIFIPVIYVLDTQFNDSEESISLRTFVKMVIIVLGLSPATRNTLRMALGI | |||||||||||||||||||
1 | 6idpA | 0.08 | 0.08 | 3.11 | 1.23 | SPARKS-K | IQVGLGIATTAVISRAIGLGGLVIVIGGIGVALIALVLYLLLGLLGAPYWLWWLASAWTGAMLYFYYSVCRANGNTL---------LPGTLMMVTSVLNLILDPIFIFTFDLGIDGAAIATIIAFGVGIAIVAPKVAQRQWTSYQWALGHIMGPAMLSQLLPPLSSMFATKLLASRFEFFALVAVLAMTMSLPPMIGRMLGAKE--ITHIRQLVRIACQFVLGFQLLIALVTYVFATPLAELMTSETEVSQILNLHLVIVPISLGALGICMLMVSV | |||||||||||||
2 | 5xjjA | 0.10 | 0.09 | 3.33 | 1.12 | FFAS-3D | --------------------IASNIPICFIISIIWFYIENILISLGQDPDGSYAPVLFAQAIVIPLTRFLLTQGL---------VLPLLYTAVTTLLFHVFVCWVFVLVFVLGSNGPAMATSVSFWFYAVILSCYVRFSSSCEKKQFFQYGVPSAAMICLEWWLFELLILCSGLLSNPKLETSVLSIAAVSTRVS-NNLGAGNPQVARVSVLAGLCLWLVESAFFSILLFTFRNIIGYAFSNSKEVVDYVADLSPLLCLSFILDGFTAVLNGVA-- | |||||||||||||
3 | 3rkoC | 0.14 | 0.13 | 4.30 | 1.29 | CNFpred | --------------------AIDGLSLLMVVLTGLLGVLAVLCSWKEIEYQGFFHLNLMWILGGVIGVFLAID--------MFLFFFFWEMMLVPMYFLIALWGHKASDGKTAATKFFIYTQASGLVMLIAILALVFVHWTFNYEEL-YLLMLGFFIAFAVKMPVHGWLPDAHSAPTAGSVDLAGILLKTAAYGLLRFSLPNASAEFAPIAMWLGVTDIKRLIAYTSVSHMGFVLIAIYT-----SQLAYQGAVIQMIAHGLSAAGLFILCGQLYE | |||||||||||||
4 | 5y78A | 0.10 | 0.09 | 3.45 | 1.03 | Neff-PPAS | IFNIANKRTLNMWKY-----PWVLSTIQLGVGALYCTFLWVLGLRTPNVSKKLIKALIWPSLGHTLGHAATCMSFSL-------VAISFTHVVKSAEPVFGAVGSALVLGEFFH----PLTYLTLVPIVSGVALSAATELTFTWTGFITAMISNVAFVTRNITSKFTMVDFKNEKTLIAQNTYALITIISFFMELPFALLMEGFPPLVSAIAGVSKAKLFGSIMFCSLFYHLYNEVSYLCLDNVS-----------PVSFSIGNTIKRVIIIFGSI | |||||||||||||
5 | 6eznF1 | 0.08 | 0.08 | 3.05 | 1.09 | PROSPECTOR2 | SCVLSVFRLFAVIKFESIIHEFDPWFNYRALMTTSAFIWHALRNWLGLPIDIRNVCVLFAPLFSGVTEFTKE--IKDASAGLIAIVPGYISIAITLLMVTFMFWIKAQKTGSIMHATCAALFYFITNLIPLHVFLLILMGRYSSKLYSAYTTWYAIGTVASMQLPIRSNDHMAALGVFGLIQIVAFGDFVKGQISTAKFKVIMQPVSWPAFFFDTHFLTLTPVICVSAAVALSKIFDIYLDFKIKPAALLAKLIVSGSFIFYLYLFVFHSTWVTYS | |||||||||||||
6 | 4z3nA | 0.11 | 0.11 | 3.89 | 1.16 | SPARKS-K | IQIGMGSLLSRAIGMQRLDRAQRILSVGIIIALFFAIVITVLGYVYASIITEFYYYSLSIMLIGVMMGLFQGAGKI----------MVIMKASLLGALVNIMLDPIMIFVFGVKGVALASFLAQLSMVAYFIYTLIYREFLSVGMAQMLMQLIIAVGIVIYNFFIVRLDVNAMAAYFIITPMLAIATALLTVVGQNWGHG-NVTRTLNAYWAAVALAFSIVLVLAVMHIVLAPWMYPLFTRVVAVSDYAVLQTRIMLPFVAISLLASEYYQAIGKP | |||||||||||||
7 | 5ztkA | 0.11 | 0.10 | 3.63 | 1.10 | FFAS-3D | ----IESLF---DYSAGQFEFIDHLLTMGVGVHFAALIFFLVVSQFVAPKYRIATALSCIVMVSAGLILNSQAVMWTDAYAYVDFSNGYRYVNWMATIPCLLLQLLIVLNLKGKELFSTATWLILAAWGMIITGYVGQLYEVDDIAQLMIWGAVSTAFFVVMNWIVGTKIFKNRAT--MLGGTDSTITKVFWLMMFAWTLY----PI-AYLVPAFMNN-ADGVVLRQLLFTIADISSK----------VIYGLMITYIAIGYVPAQQALGRI---- | |||||||||||||
8 | 3rkoB | 0.12 | 0.11 | 3.82 | 1.28 | CNFpred | VGFLIHMYASWYMRG-----EEGYSRFFAYTNLFIASMVVLVLAD------NLLLMYLGWEGVGLCSYLLIGFYNGAAAMKAFVVTGDVFLAFALFILYGTLNFREMVELA-MWATLMLLGGAVGKSAQLPLQTWLADAM-AGPTPVSALIHAATMVTAGVYLIARTHGLFLMTEVLHLVGIVGAVTLLLAGFAALVQ------TDIKRVLAYSTMSQIGYMFLALGVQAWDAAIF--------------HLMTHAFFKALLFLASGSVILACHHE | |||||||||||||
9 | 3wajA1 | 0.10 | 0.10 | 3.74 | 1.04 | PROSPECTOR2 | LIENTIHIWFDPFTYYPSATSGESLRAVLAFIPAILPVYLLTREVFGFNDHHIWEAFWQVSALGTFLLAYNRWKLTARQMAYPVIAGITGAGFIIAPIILAFMFFAFVLAGFVNADRKNLSLVAVVTFAVSALIYLPFSTIFYSPFQLLVLLGSAVIAAAFYQIEKWNDVGFFERVGLGRKGMPLAVIVLTALIMGLFFVLTRRSFPEMALLIWAIAMFYFAAVSAVYSALALSVVFDKLHFRVAFALLIALAAIYPTYILATPDGEKYDEYYLQL | |||||||||||||
10 | 4tq3A | 0.09 | 0.07 | 2.79 | 1.16 | SPARKS-K | ---------------SKYLRLLRPVAWLCFLLPYAVGFGFGITP---NASQHAVLGLLSFAFWMAFSFTINALYDRDRLHAFLALSLATAAAIFLAMLGANIIGYVYSAPPRFKAWPVMDVICNALAAVLAFYAGLSIGGAEVPIAIYPAAFFLAATFYIPTAVPVFFGPERALKSLYPLSAITVILWAYVFLMA---------------------ERIEIKVISPLIIAYTLIYTFIINSRWDGEKILTPFGIISALFIAYGFAVISV------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |