>PF01831 (249 residues) AFDAVCSEALSAFYAVPSDETHFKVCGFYSPAIERTNCWLRSTLIVMQSLPLEFKDLEMQ KLWLSYKAGYDQCFVDKLVKSVPKSIILPQGGYVADFAYFFLSQCSFKAYANWRCLECDM ELKLQGLDAMFFYGDVVSHMCKCGNSMTLLSADIPYTLHFGVRDDKFCAFYTPRKVFRAA CAVDVNDCHSMAVVEGKQIDGKVVTKFIGDKFDFMVGYGMTFSMSPFELAQLYGSCITPN VCFVKGDVI |
![]() | |
|
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | AFDAVCSEALSAFYAVPSDETHFKVCGFYSPAIERTNCWLRSTLIVMQSLPLEFKDLEMQKLWLSYKAGYDQCFVDKLVKSVPKSIILPQGGYVADFAYFFLSQCSFKAYANWRCLECDMELKLQGLDAMFFYGDVVSHMCKCGNSMTLLSADIPYTLHFGVRDDKFCAFYTPRKVFRAACAVDVNDCHSMAVVEGKQIDGKVVTKFIGDKFDFMVGYGMTFSMSPFELAQLYGSCITPNVCFVKGDVI | |||||||||||||||||||
1 | 3mp2A | 0.12 | 0.10 | 3.39 | 2.20 | SPARKS-K | ---------------SLPPFKTTNLNGKIILKQGDNNCWINACCYQLQAFDFFNN-----EAWEKFKKGDVMDFVNLCYAATTLA--RGHSGDAEYLLELMLNDYSTAKIVLAAKCGCGEKIVLERAVFKLLKESFNYGVCDCMQV-------NTCRFLSVEGSGVFVHDILSMFVVKPVMHAVYQNGHYMVDDHGYCVDGMGIKPLKKRCYTSTLFINANVMT------------------------- | |||||||||||||
2 | 3mp2A | 0.14 | 0.11 | 3.73 | 2.34 | FFAS-3D | ---------------SLPPFKTTNLNGKIILKQGDNNCWINACCYQLQAFDFFNN-----EAWEKFKKGDVMDFVNLCYAATTLAR--GHSGDAEYLLELMLN--DYSTAKIVLAAKCGCGEKEIVLERAVFKLTPYGVCGDCMQVNTCRFLSVEGSVHDILSKQTPEAMFVVKPVMHAVYTGTTQNGHYMVDDHGYCVDGMGIKPLKKRCYTSTLFINANVMT------------------------- | |||||||||||||
3 | 3e9sA | 0.18 | 0.16 | 5.11 | 5.13 | HHpred | -AFEYYHTELGRYMSHTKKWKFPQVGGLTSIKWADNN-YLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNK--TVGELGDVRETMTHLLQHANLESALNVVCKHCGQKTTLTGVEAVMYMGTGVSIPCVCGRDATQVQQESSFVMMSAPPAEYKLQ---QGTFLCANEYTNYQCGHYTHITAKYRIDGAHLTKMSEYPVTDVFYKETSYTTTI----------------------- | |||||||||||||
4 | 3mp2A | 0.13 | 0.10 | 3.63 | 1.84 | MUSTER | ---------------SLPPFKTTNLNGKIILKQGDNNCWINACCYQLQAFDFFN-----NEAWEKFKKGDVMDFVNLCYAATTLA--RGHSGDAEYLLELMLNDYSTAKIVLAAKCGCGEKIVLERAVFKLTPLKEYGVCGDCMQVNTCRFLSVEGSGVF-VHDILSKQTPEAMFVVKPVMHAVTQNGHYMVDDHGYCVDGMGIKPLKKRCYTSTLFINANVMT------------------------- | |||||||||||||
5 | 5ko3A | 0.16 | 0.14 | 4.66 | 2.69 | CNFpred | TFLHRFYSLKAA----VHGWKMVVCDKVRSLKLSDNNMYLNAVIMTLDLLDIKFVIPALQHAFMKHKGGDSTDFIALIMAYG--NCTFGAPDDASRLLHTVLAKAE-RMVWREWCNVCGIKDVLQGLKACCYVG-RMTYVCQCGGERHRQLHTTPWLLLSGTPNEKLVTTSTAPDFVAFNVFQGIAVGHYVHARLILKFDSGTVSKTWKCKVTDVLFPGQKYSS------------------------- | |||||||||||||
6 | 3e9sA | 0.18 | 0.15 | 4.98 | 2.58 | HHsearch-2 | EAFEYYHTLDESYMLNTKKWKFPQVGGLTSIKWADNN-YLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNK--TVGELGDVRETMTHLLQHANLESRVLNVVCKCGQKTTLTGVEAVMYMGTLVSIPCVCGRDATQVQQESSFVMMSAPPAEY--------KLQQGLCANNYQCGHYTHITALYRIDGAHLTKMYKGPVTDVFYKETSYTTTI----------------------- | |||||||||||||
7 | 3mp2A | 0.13 | 0.10 | 3.51 | 2.56 | Neff-PPAS | ----------------LPPFKTTNLNGKIILKQGDNNCWINACCYQLQAFDFFN-----NEAWEKFKKGDVMDFVNLCYAATTL--ARGHSGDAEYLLELMLN--DYSTAKIVLAAKCGCGEKEIVLERAVFKLTNYGVCGDCMQVNTCRFLSVEGSGVFVHDILSK-QTPEAMFVVKPVMHAVYQNGHYMVDDHGYCVDGMGIKPLKKRCYTSTLFINANVMT------------------------- | |||||||||||||
8 | 3mp2A | 0.13 | 0.10 | 3.51 | 3.98 | HHsearch | ---------------SLPPFKTTNLNGKIILKQGDNNCWINACCYQLQAFDFFN-----NEAWEKFKKGDVMDFVNLCYAATTL--ARGHSGDAEYLLELMLNDYSTAKIVLAAKCGCGEKEVLERAVFKLTPLKFNYGVCDCMQVNTCRFLEGSGVFVHD-ILSK--QTPEAMFVVKPVMHATTQNGHYMVDDHGYCVDGMGIKPLKKRCYTSTLFINANVMT------------------------- | |||||||||||||
9 | 4x2zA | 0.16 | 0.14 | 4.80 | 1.62 | PROSPECTOR2 | QYGLDAQKYVIYLQTLAQKWNVQYRDNFLILEWRDGNCWISSAIVLLQAAKIRFKG-FLTEAWAKLLGGDPTDFVAWCYASCTAK--VGDFSDANWLLANLAEHYTNAFLKKRVSCNCGIKSELRGLEACIQPVRQYSNCPTCGANNTDIEASLPYLLLFATDGPATVDC-DEDAVGTVVFVGSTNSGHCYTQAAGQAFDNLAKDRKFGKKSPYITAY---------------------TRFAFKNETS | |||||||||||||
10 | 4x2zA | 0.18 | 0.13 | 4.19 | 1.91 | SAM | -----------------QKWNVQYRDNFLILEWRDGNCWISSAIVLLQAAKIRFKG-FLTEAWAKLLGGDPTDFVAWCYASCTA--KVGDFSDANWLLANLAEHFDADYTKKRVSCNCGIKSELRGLEACIQPVRQYSNCPTCGANNTDIEASLPYLLLFATDGPATV--DCDEDAVGTVVFVSTNSGHCYTQAAGQAFDN------------------------------------------------ | |||||||||||||
|
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |