>PF00780 (259 residues) AAIIDHERIALGNEEGLFVVHVTKDEIIRVGDNKKVHQIELIPSEQLIAVISGRNRHVRL FPMAALDGRETEFYKLAETKGCQSXVSGHVRHGALTCLCVAMKRQVLCYELNQSKTRHKK IKEIQVQGNVQWMSIFSDRLCVGYQSGFLKYPLHGEGSPYSLLHPDDHTLSFISQQPTDA ICAVEISNKEYLLCFSSVGVYVDCQGRRSRQQELMWPATPSSCCYNAPYLSVYSENAIDI FDVNSMEWIQTIPLKKVTA |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | AAIIDHERIALGNEEGLFVVHVTKDEIIRVGDNKKVHQIELIPSEQLIAVISGRNRHVRLFPMAALDGRETEFYKLAETKGCQSXVSGHVRHGALTCLCVAMKRQVLCYELNQSKTRHKKIKEIQVQGNVQWMSIFSDRLCVGYQSGFLKYPLHGEGSPYSLLHPDDHTLSFISQQPTDAICAVEISNKEYLLCFSSVGVYVDCQGRRSRQQELMWPATPSSCCYNAPYLSVYSENAIDIFDVNSMEWIQTIPLKKVTA | |||||||||||||||||||
1 | 5o51A | 0.11 | 0.10 | 3.77 | 2.29 | SPARKS-K | LVPVDGRKLVYGTDSGIFISERWSAKPRRVLDASQVTQIDTLEEYQLLLVLANK--TLSSYPMEALELAEGQNSVAKRQGHAFFKAGIGLGR--HLVCSVKTSTIKVYEP-----TLKPFKEYYIPAESSSIHFLRSTLCVGCARGFEVVSLET-TETQSLLDQADTSLDFVAKENVKPIHIERMN-GEFLLNYSDFSFFVNRNGWRARPWKISWEGNPNAFALSYPYILAFEPNFIEIRHIETSELIHIMTGKNIRM- | |||||||||||||
2 | 5o51A | 0.21 | 0.21 | 6.61 | 2.71 | FFAS-3D | LVPVDGRKLVYGTDSGIFISERWPKDPRRVLDASQVTQIDTLEEYQLLLVLANKTLSSYPMEALELEGQNSVAKRPKKIQGHANFFKAGIGLGRHLVCSVKTSALSSTIKV--YEPTLKPFKEYYIPAESSSIHFLRSTLCVGCARGFEVVSLETTET-QSLLDQADTSLDFVARKENVKPIHIERMNGEFLLNYSDFSFFVNRNGWRARPDKISWEGNPNAFALSYPYILAFEPNFIEIRHIETSELIHIMTGKNIR- | |||||||||||||
3 | 5o51A | 0.24 | 0.23 | 7.10 | 3.27 | HHpred | LVPVDGRKLVYGTDSGIFISERWPKKPRRVLDASQVTQIDTLEEYQLLLVLAN--KTLSSYPMEALELAEGRPKKI--QGHANFFKAGIG-LG-RHLVCSVKTSTIKVYEP-----TLKPFKEYYIPAESSSIHFLRSTLCVGCARGFEVVSLETT-ETQSLLDQADTSLDFVARKNVKPIHIERMN-GEFLLNYSDFSFFVNRNGWRARPDWISWEGNPNAFALSYPYILAFEPNFIEIRHIETSELIHIMTGKNIRM | |||||||||||||
4 | 5o51A | 0.23 | 0.22 | 7.02 | 4.89 | MUSTER | VPVDGGRKLVYGTDSGIFISERWSAKPRRVLDASQVTQIDTLEEYQLLLVLANK--TLSSYPMEALELAEGQNSVAKRQGHANFFKAGIGLGRHLVCSVKTSASTIKVYEP-----TLKPFKEYYIPAESSSIHFLRSTLCVGCARGFEVVSLE-TTETQSLLDQADTSLDFVARKENVKPIHIERMNGEFLLNYSDFSFFVNRNGWRARPDKISWEGNPNAFALSYPYILAFEPNFIEIRHIETSELIHIMTGKNIRM | |||||||||||||
5 | 5o51A | 0.24 | 0.22 | 6.98 | 3.84 | CNFpred | LVPVDGRKLVYGTDSGIFISERW-AKPRRVLDASQVTQIDTLEEYQLLLVLAN--KTLSSYPMEALELAE-RPKKIQ--GHANF-KAGIGL--GRHLVCSVKTSTIKVYEP-----TLKPFKEYYIPAESSSIHFLRSTLCVGCARGFEVVSLET-TETQSLLDQADTSLDFVARENVKPIHIERMN-GEFLLNYSDFSFFVNRNGWRARDWKISWEGNPNAFALSYPYILAFEPNFIEIRHIETSELIHIMTGKNIRM | |||||||||||||
6 | 5o51A | 0.24 | 0.23 | 7.21 | 2.83 | HHsearch-2 | LVPVDGRKLVYGTDSGIFISERWPKKPRRVLDASQVTQIDTLEEYQLLLVLANKT--LSSYPMEALELAEGQNAKRPKQGHANFFKAGIG-LGR-H-LVCSVKTTIKVYEP-----TLKPFKEYYIPAESSSIHFLRSTLCVGCARGFEVVSLET-TETQSLLDQADTSLDFVARKNVKPIHIERMN-GEFLLNYSDFSFFVNRNGWRARPDKISWEGNPNAFALSYPYILAFEPNFIEIRHIETSELIHIMTGKNIRM | |||||||||||||
7 | 5o51A | 0.23 | 0.22 | 7.02 | 3.43 | Neff-PPAS | VPVDGGRKLVYGTDSGIFISERWSAKPRRVLDASQVTQIDTLEEYQLLLVLANK--TLSSYPMEALELAEGQNSVAKRQGHANFFKAGIGLGRHLVCSVKTSASTIKVYEP-----TLKPFKEYYIPAESSSIHFLRSTLCVGCARGFEVVSLE-TTETQSLLDQADTSLDFVARKENVKPIHIERMNGEFLLNYSDFSFFVNRNGWRARPDKISWEGNPNAFALSYPYILAFEPNFIEIRHIETSELIHIMTGKNIRM | |||||||||||||
8 | 5o51A | 0.24 | 0.23 | 7.10 | 4.25 | HHsearch | LVPVDGRKLVYGTDSGIFISERWPKKPRRVLDASQVTQIDTLEEYQLLLVLANKT--LSSYPMEALELAEGQNAKRPKQGHANFFKAGIG-LGR-HLVCSVKTSTIKVYEP-----TLKPFKEYYIPAESSSIHFLRSTLCVGCARGFEVVSLET-TETQSLLDQADTSLDFVARKNVKPIHIERMN-GEFLLNYSDFSFFVNRNGWRARPDKISWEGNPNAFALSYPYILAFEPNFIEIRHIETSELIHIMTGKNIR- | |||||||||||||
9 | 5o51A | 0.23 | 0.22 | 7.01 | 2.40 | PROSPECTOR2 | LVPVDGRKLVYGTDSGIFISERWPKKPRRVLDASQVTQIDTLEEYQLLLVLANK--TLSSYPMEALELAEGQNSVAKRPGHANFFKAGI--GLGRHLVCSVKTSTIKVYEP-----TLKPFKEYYIPAESSSIHFLRSTLCVGCARGFEVVSLET-TETQSLLDQADTSLDFVARKENVKPIHIERMNGEFLLNYSDFSFFVNRNGWRARPWKISWEGNPNAFALSYPYILAFEPNFIEIRHIETSELIHIMTGKNIRM | |||||||||||||
10 | 5o51A | 0.24 | 0.23 | 7.10 | 2.98 | SAM | -LVPVGRKLVYGTDSGIFISERWPKKPRRVLDASQVTQIDTLEEYQLLLVLANKT--LSSYPMEALELAEGQNAKRPKKGHANFFKAGIG-LGR--HLVCSVKTTIKVYEP-----TLKPFKEYYIPAESSSIHFLRSTLCVGCARGFEVVSLET-TETQSLLDQADTSLDFVARKNVKPIHIERMN-GEFLLNYSDFSFFVNRNGWRARPDKISWEGNPNAFALSYPYILAFEPNFIEIRHIETSELIHIMTGKNIR- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |